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bacTRAP project










Publications

[1] A translational profiling approach for the molecular characterization of CNS cell types. Heiman, M., Schaefer, A., Gong, S., Peterson, J. D., Day, M., Ramsey, K. E., Suarez-Farinas, M., Schwarz, C., Stephan, D. A., Surmeier, D. J., Greengard, P. and Heintz, N. 2008, Cell.
Pubmed: [19013281]
GEO: [GSE13394]

[2] Application of a translational profiling approach for the comparative analysis of CNS cell types. Doyle, J. P., Dougherty, J. D., Heiman, M., Schmidt, E. F., Stevens, T. R., Ma, G., Bupp, S., Shrestha, P., Shah, R. D., Doughty, M. L., Gong, S., Greengard, P. and Heintz, N. 2008, Cell.
Pubmed: [19013282]
Supplemental table 5: [download]
GEO: [GSE13379]

[3] Analytical approaches to RNA profiling data for the identification of genes enriched in specific cells. Dougherty, J. D., Schmidt, E. F., Nakajima, M. and Heintz, N. 2009, submitted.
Pubmed:

Data

Raw data for [1] and [2] are available from GEO: [GSE13394], [GSE13379]
Specificity index plots for all genes [3]

Rcode

Function for calculating specificity index.

Protocols

Protocol for genotyping Mice.
Protocol for TRAP.